Fionn's Research

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Fionn's Research

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Vibrational spectroscopy
🦆 Cyclic Voltametry
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  • Wavelength: 190 - 900 nm
  • Measures: Electronic emission
  • Uses: conjugation Aromatic Concentration
  • General notes
    • Absorption and emission spectra are usually mirrored.
    • Due to Kasha's Rule, all observed transitions are between S1, S0, and T1 states.
    • A fine structure is observed from the relaxation to higher vibrational states of S0.
    • The most intense transitions occur at the highest orbital overlap, according to the Frank Condon principle.
    • If orbitals are shifted and there is imperfect overlap, the 0,0 transition may lose intensity or disappear, resulting in a Stokes Shift.
    • Transitions are numbered in the form ((\nu,\nu^{\prime})), and depending on the overlap of wavefunctions, the major peak may vary.
  • Kinetics

    • There are multiple competing processes that govern the kinetics.
    • Quantum yield (\phi = \text{Quantum yield} = \frac{\text{No. } M^* \text{ that give } h\nu}{\text{No. } M^* \text{ made}} = \frac{k_r}{k_{tot}})
    • The higher the quantum yield, the better the spectral imaging.
    • If a molecule cannot do ISC, (\phi = \frac{k_{rad}}{k_{nr}+k_{rad}}), where (nr) denotes non-radiative processes.
    • Lifetime (\tau) is the duration for which (M^*) exists: (\tau = \frac{1}{k_{tot}}).
    • (\frac{d[M^]}{dt} = -k_{rad}[M^]-k_{nr}[M^*])
      • (\frac{d[M^]}{[M^]} = -(k_{rad}+k_{nr})dt)
      • (M^* = [M^*]_{(t=0)}\exp{(-t/\tau)})
    • Fluorescent: (\tau) = 10 ps - 100 ns
    • Phosphorescent: (\tau) = 100 ns - 1 s
  • Time Resolved Emission Spectroscopy (TRES)

    • Excitation is achieved using a sharp, short-pulsed laser.
    • After each pulse, emission is measured with respect to time.
    • The shorter the pulse, the better the spectrum. Poor pulses can be deconvoluted.
    • Quenching

      • A Quencher can accept the excitation from a molecule and let it relax without light formation.
      • (M^* + Q \rightarrow Q^* + M \rightarrow Q + M)
      • The more Q is added, the less emission is measured.
      • (\frac{d[M^]}{dt} = -(k_{nr}+k_{rad})[M^]-k_q[Q][M^*])
      • Spectra can be compared with and without quencher analysis via a Stern-Volmer analysis specdef.
        • (\frac{I_f^o}{I_f} = \frac{\phi_f^o}{\phi_f} = \left(\frac{k_{rad}}{k_{nr}+k_{rad}}\right)\left(\frac{k_{rad}}{k_{nr}+k_{rad}+k_{Q}}\right)^{-1} = 1 + \tau_0 k_q [Q])
        • A Stern-Volmer plot quantifies fluorescence loss as a function of quencher addition specdef.
      • Quenching mechanisms
        • (^{1}M^* + Q \rightarrow \ ^{1}M + Q^*)
          • Forster Mechanism and Dexter Mechanism
        • (^{3}M^* + \ ^{1}Q \rightarrow \ ^{1} M + \ ^{3}Q^*)
        • (^{3}M^* + \ ^{3}Q \rightarrow \ ^{1} M + \ ^{1}Q^*)
          • Oxygen concentration can be determined due to triplet oxygen.
      • Use of the Stern-Volmer plot in real life:
        • A polymerization is carried out with a chromophore and quencher.
        • In the liquid state, quenching occurs easily.
        • In the solid state, quenching can no longer occur, so fluorescence increases.
    • Polarization

      • The transition dipole moment results in polarized light being emitted, but tumbling molecules mean this cannot be measured.
      • To measure polarization, the sample must be frozen as a glass.
      • Anisotropy is the extent of polarization of light specdef.
        • This can be plotted over a reaction showing when solidification takes place, e.g., resin curing.
  • Instrumentation #UV-vis

    • Emission scan - Fixed incident wavelength, emission wavelength scanned specdef.
    • Excitation scan - Scanned incident wavelength, fixed emission detection specdef.
      • Can pick up the emissive parts of absorption experiments.
    • Inner filter effect - Highly concentrated samples may result in lower emissions due to all excitation happening at the light source point and not through the sample.
    • Raman shifts may be visible in very low concentration spectra.
  • Flashcards
    • How is quantum yield calculated? spcards
      • (\phi = \frac{No. \ M^* \ that \ give \ h\nu}{No. \ M^* \ made} = \frac{k_f}{k_{tot}})
      • (\phi = \frac{k_{rad}}{k_{rad}+ k_{non \ rad}})
    • How is the lifetime (\tau) of an excited molecule calculated? spcards
      • (\tau = \frac{1}{k_{tot}})
    • What is the typical lifetime of a fluorescent compound? spcards
      • 10 ps - 100 ns
    • What is the lifetime of a phosphorescent compound? spcards
      • 100 ns - 1 s
    • In Time Resolved Emission Spectroscopy (TRES), what kind of light source is used? spcards
      • Sharp, short-pulsed laser.
    • How can badly pulsed spectra be improved in emission spectroscopy? spcards
      • Deconvolution
    • What is a Stern-Volmer plot? spcards
      • (\frac{I_f^0}{I_f} = \frac{\phi_f^0}{\phi_f} = 1 + \tau_0 k_q [Q])
      • Fluorescence as a function of quencher addition.
    • Give the Forster Mechanism for quenching. spcards
      • (^{3}M^* + \ ^{1}Q \rightarrow \ ^{1} M + \ ^{3}Q^*)
    • Give the Dexter Mechanism for quenching. spcards
      • (^{3}M^* + \ ^{3}Q \rightarrow \ ^{1} M + \ ^{1}Q^*)
    • Why can we not measure polarization in liquid state emission spectroscopy? spcards
      • The molecules are tumbling.
    • What is Anisotropy? spcards
      • The extent of light polarization.
    • What is an Emission scan? spcards
      • Fixed incident wavelength, emission wavelength scanned.
    • What is an Excitation scan? spcards
      • Incident wavelength scanned with fixed emission wavelength detection.
    • What is the Inner filter effect? spcards
      • Highly concentrated samples show low emission due to emission occurring close to the light source and not through the whole sample.
Connected Pages
On this page
  1. Kinetics
  2. [[Time Resolved Emission Spectroscopy (TRES)|Time Resolved Emission Spectroscopy (TRES)]]
    1. Quenching
    2. Polarization
  3. Instrumentation #[[UV-vis|UV-vis]]
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🌈Spectroscopy